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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs12412412 chr10:81975334 A/G 0.000114 487 15.78 15.9 9.77 KM Plot
THCA rs12412999 chr10:82008141 C/T 9.57E-5 481 16.2 15.7 13.5 KM Plot
THCA rs12413715 chr10:81687360 G/T 0.000114 484 16.08 16.57 9.77 KM Plot
THCA rs12414096 chr10:81713629 A/G 0.0002 489 15.97 15.9 13.5 KM Plot
THCA rs12414332 chr10:81840955 C/T 0.000146 487 16.2 15.98 9.77 KM Plot
THCA rs12414465 chr10:82381031 C/T 5.48E-8 472 16.3 15.32 11.47 KM Plot
THCA rs12414521 chr10:81949534 G/C 0.000114 488 15.93 16.65 9.77 KM Plot
THCA rs12414877 chr10:81780708 A/G 0.000123 488 15.93 15.98 9.77 KM Plot
THCA rs12414891 chr10:81690385 G/C 0.000112 485 16.2 16.57 9.77 KM Plot
THCA rs12415523 chr10:81691976 T/C 0.000112 485 16.2 16.57 9.77 KM Plot
THCA rs12415870 chr10:81949470 A/G 0.000114 488 15.93 16.65 9.77 KM Plot
THCA rs12416493 chr10:81734921 G/A 0.000198 490 15.93 15.9 13.5 KM Plot
THCA rs12416666 chr10:81627277 C/T 0 476 16.23 15.83 5.92 KM Plot
THCA rs12420476 chr11:112044398 A/C 4.13E-5 484 15.93 16.23 12.37 KM Plot
THCA rs12422249 chr12:58127967 G/A 0.000163 487 15 17.88 16.8 KM Plot